Abstract: Mountain ungulates perform a key role in maintaining the balance of ecosystems as they are the primary consumers of vegetation and prey for large predators. The mountain ranges of northern Pakistan are home to six species of mountain ungulates, and the Himalayan ibex (Capra sibirica), hereafter ibex, is the most abundant among them. This study was conducted in three administrative regions of northern Pakistan, viz. Gilgit-Baltistan (GB), Azad Jammu and Kashmir (AJK), and Khyber Pakhtunkhwa (KP), to generate a range-wide density pattern map of ibex. A double-observer survey was conducted in 25 study sites during 2018–2021 across the ibex distribution range, covering an area of about 35,307 km2, by walking transects totaling 1647 km. Within the ibex range where the survey was not conducted due to financial and logistical constraints, we obtained species population information from local wildlife departments’ most recent annual survey data. The aim was to generate a density map for the entire ibex range. Using the BBRe-capture package in program R, we estimated an ibex population of 7639 (95 % CI) with a mean density of 0.21/km2 in the surveyed area. Combining with the secondary data from un-surveyed areas, the total population estimate for the country came to 10,242 ibex. The largest population densities were observed in four valleys (Shimshal, Gulkin-Hussaini, Khyber, and Khunjerab) of the Karakoram-Pamir range, followed by the Hindu Kush range (Chitral Wildlife Division [WD]). The central and eastern parts of the Karakoram range had moderate to low densities, while the Himalayan range (e.g., Astore Valley) supported a small population. The mean herd size was 15 individuals (range: 5–41), and the average detection probability of observers A and B was 0.69 and 0.48, respectively. The average male and young ratios per 100 females were estimated to be 75 and 81, respectively. The range-wide density map developed during the study provided an evidence for the impact of trophy hunting programs and an objective tool for range-wide conservation planning of the species.

Abstract: Snow leopards (Panthera uncia) frequently prey on livestock throughout their range, posing a potential threat to human livelihoods and endangering the predator’s own survival. In this study, we document seven incidents of snow leopards intruding into livestock corrals and engaging in surplus killing in three districts of Badakhshan, Afghanistan. Six of the predation incidents were attributed to a single individual, occurring in five locations of Wakhan District and eventually in Yumgan District, where the captured animal was relocated. The remaining predation incident occurred in Keran-wa Munjan District, marking the first recorded evidence of snow leopards in this area. In all but one of the incidents, the predator was trapped in the corral it intruded and safely released back to the wild with the support of the National Environmental Protection Agency (NEPA) and Wildlife Conservation Society (WCS) team in Afghanistan. Local communities have been supportive in releasing the snow leopard despite losses of over 50 livestock. To mitigate negative interactions between snow leopards and livestock, conservation efforts should focus on conserving prey species, implementing predator- proof measures for livestock corrals, and utilizing collar tracking when a trapped snow leopard is found in a corral. Unfortunately, when an individual repeatedly enters livestock corrals and continues killing livestock, capture and relocation to captivity often become the only viable option to address the problem and ensure the animal’s safety from retaliatory action by affected herders.

Abstract: The alpine ecosystems and communities of central Asia are currently undergoing large-scale ecological and socio-ecological changes likely to affect wildlife-livestock-human disease interactions and zoonosis transmission risk. However, relatively little is known about the prevalence of pathogens in this region. Between 2012 and 2015 we screened 142 rodents in Mongolia’s Gobi desert for exposure to important zoonotic and livestock pathogens. Rodent seroprevalence to Leptospira spp. was>1/3 of tested animals, Toxoplasma gondii and Coxiella burnetii approximately 1/8 animals, and the hantaviruses being between 1/20 (Puumala-like hantavirus) and<1/100 (Seoul-like hantavirus). Gerbils trapped inside local dwellings were one of the species seropositive to Puumala-like hantavirus, suggesting a potential zoonotic transmission pathway. Seventeen genera of zoonotic bacteria were also detected in the faeces and ticks collected from these rodents, with one tick testing positive to Yersinia. Our study helps provide baseline patterns of disease prevalence needed to infer potential transmission between source and target populations in this region, and to help shift the focus of epidemiological research towards understanding disease transmission among species and proactive disease mitigation strategies within a broader One Health framework.

Abstract: The Pallas’s cat (Otocolobus manul) is one of the most understudied taxa in the Felidae family. The species is currently assessed as being of “Least Concern” in the IUCN Red List, but this assessment is based on incomplete data. Additional ecological and genetic information is necessary for the long-term in situ and ex situ conservation of this species. We identified 29 microsatellite loci with sufficient diversity to enable studies into the individual identification, population structure, and phylogeography of Pallas’s cats. These microsatellites were genotyped on six wild Pallas’s cats from the Tibet Autonomous Region and Mongolia and ten cats from a United States zoo-managed population that originated in Russia and Mongolia. Additionally, we examined diversity in a 91 bp segment of the mitochondrial 12S ribosomal RNA (MT-RNR1) locus and a hypoxia-related gene, endothelial PAS domain protein 1 (EPAS1). Based on the microsatellite and MT-RNR1 loci, we established that the Pallas’s cat displays moderate genetic diversity. Intriguingly, we found that the Pallas’s cats had one unique nonsynonymous substitution in EPAS1 not present in snow leopards (Panthera uncia) or domestic cats (Felis catus). The analysis of the zoo-managed population indicated reduced genetic diversity compared to wild individuals. The genetic information from this study is a valuable resource for future research into and the conservation of the Pallas’s cat.

Abstract: Snow leopards (Panthera uncia) are elusive endangered carnivores found in remote mountain regions of Central Asia. New methods for identifying and counting snow leopards are needed for conservation and management efforts. To develop molecular genetic tools for individual identification of hair and faecal samples, we screened 50 microsatellite loci developed for the domestic cat (Felis catus) in 19 captive snow leopards. Forty-eight loci were polymorphic with numbers of alleles per locus ranging from two to 11. The probability of observing matching genotypes for unrelated individuals (2.1 x10-11) and siblings (7.5x10-5) using the 10 most polymorphic loci was low, suggesting that this panel would easily discriminate among individuals in the wild.