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Author Esson, C. L. pdf 
  Title A One Health approach to investigating the health and prevalence of zoonotic pathogens in snow leopards, sympatric wildlife, domestic animals and humans in the South Gobi Desert in Mongolia Type Journal Article
  Year 2018 Publication PhD Thesis Abbreviated Journal  
  Volume Issue Pages 1-242  
  Keywords  
  Abstract The endangered Snow leopard (Panthera uncia) inhabits the high mountain regions through central Asia and is subjected to numerous threats including poaching for traditional Chinese medicine, retribution killing for preying on domestic stock, and habitat fragmentation. However the occurrence and impact of disease on snow leopard populations is unknown. As emerging infectious diseases of wildlife can be an insidious yet important cause of population decline due to mortality or reproductive failure, my study aimed initially to gain knowledge of pathogens circulating among wild and domestic hosts in this region. I used a broad One Health approach to survey a range of species to collect data on disease occurrence that would be useful in improving human and livestock health, as well as snow leopard conservation.

This study is set in the Tost Mountains of the South Gobi Desert of Mongolia and was prompted due to the unexplained deaths of four snow leopards detected within a short timeframe during an ecological study by members of the Snow Leopard Trust. However, investigating disease occurrence in remote, rare and endangered species is a challenge due to inaccessibility of sites, difficulty of capture, and processing samples without facilities.

A One Health approach uses multidisciplinary expertise such as ecological, medical and veterinary, to understand host, pathogen and environmental disease factors. This approach is especially useful for diseases that transfer between people, domestic animals and wildlife. As snow leopards are a rare and elusive species, my surveys were aimed at assessing pathogens circulating in snow leopards as well as in sympatric wild and domestic animals. I collected samples from the following hosts: snow leopards – the target species; rodents which are ubiquitous over the study area and are a suitable sentinel species; ibex which are a native ungulate and natural prey species of the snow leopard; domestic goats which are also a prey species of the snow leopard; free-ranging domestic dogs which interact with the goats. The local indigenous people interact with all these species including snow leopards, mostly via retribution killing. Water samples were also collected from waterholes and wells, which are communal meeting places as drinking sources for all species, hence enabling pathogen exchange. Samples collected included blood samples, faecal samples or rectal swabs and ectoparasites if present. These samples were transported to laboratories in Sweden and Belgium where I conducted diagnostic assays for zoonotic pathogens that are present in other regions of Mongolia and impact the health of humans and animals. I used enzyme- linked immune assay (ELISA), polymerase chain reaction (PCR) and next-generation sequencing (NGS) for pathogens including Coxiella burnetii, Toxoplasma gondii, Leptospira spp., Brucella spp., Yersinia pestis and tick borne encephalitis virus. Serovars of Leptospira were elucidated using microscopic agglutination tests (MAT). The dog blood samples were also tested for canine distemper virus. Ticks, faeces, rectal swabs and water were tested for bacteria, Echinococcus, Giardia and Cryptosporidium using PCR and NGS.

Health records for humans and animals in the region were not available so, in addition to testing animal samples, I used questionnaire surveys to obtain information on perceptions of the herders concerning health of their families, their domestic animals and wildlife. Questions also assessed preventative health management and treatments used.

Over three field trips I caught and sampled twenty snow leopards, 177 rodents (8 species), 41 dogs and 270 goats. I also sampled 11 waterholes/wells, and preserved 18 ticks, hundreds of fleas and collected faecal samples from ibex.

Most animals that were sampled and examined clinically appeared in good health, but the serosurvey revealed a moderate to high level of exposure to serious pathogens: C. burnetii, T. gondii and Leptospira spp. There were no published reports of human infections with these pathogens in the study area, which is likely due to a lack of testing.

Snow leopards had the highest prevalence of C. burnetii antibodies (25%), followed by rodents (16%), dogs (10%) and goats (9.5%). Goats had the highest prevalence of T. gondii antibodies (90%), dogs (66%), snow leopards (20%) and rodents (16%). Rodents had the highest prevalence of Leptospira spp. (34%), followed by snow leopards (20%) and dogs (5%). Serovars interrogans Australis was identified in the rodents and snow leopards and interrogans Ictohaemorrhagiae was identified in the rodents and dogs. Other serovars were also present from the results of the ELISA but did not match those listed in the MAT panel, so could not be identified. Goats were not tested for infection with leptospirosis. Brucella was not identified in the goats even though it occurs at high prevalence in stock in the rest of Mongolia where it is a large health and economic concern. In rodents, the zoonotic Puumala and Seoul hantavirus were identified for the first time in Mongolia. Analysis of data from rodents showed the pathogens detected (C. burnetii, T.gondii, Hanta virus and Leptospira spp.) differed significantly in prevalence, with a strong year effect driven mainly by Leptospira, which increased in prevalence across the three year study period. Toxoplasma gondii differed slightly in prevalence among rodent species. There was no significant difference in prevalence of interaction of pathogens among years or rodent species.

Poor health was detected in goats with 10 out of the 14 goats tested via haematology and biochemistry being anaemic with haematocrits less than 20%. Haematology and biochemistry values for the other animal species appeared normal. I established haematology and biochemistry reference tables for two rodent species – red-cheeked ground squirrels and jerboas.

Water samples were negative for serious pathogens. Fleas were negative for Yersinia pestis. However, ticks were positive for several genera of potential zoonoses, including Anaplasma, Bacillus, Coxiella, Clostridia, Francisella, Rickettsia, Staphylococcus, Streptococcus and Yersinia. Faecal samples were also positive for genera of potentially zoonotic bacteria including those listed above plus Bacteroides, Bordetella, Campylobacter and Enterococcus.

Results from the two questionnaire surveys revealed the main reported illness in people were colds and flu. However, the local doctor also reported hepatitis as common. She also said that the local people contracted brucellosis whereas I did not identify this pathogen in their livestock. The herders thought their main loss of stock was from predation, with wolves identified as the main predator and snow leopards as the second. Other causes of stock loss perceived as important were adverse climatic conditions such as drought or severe winters while infectious disease was not a concern. Results from these surveys also highlighted gaps in health care for humans and livestock, especially around vaccination and parasite treatments.

In summary, I found that snow leopards and other wild and domestic animals within the study area tested positive for previous exposure to several important zoonotic pathogens. These pathogens were likely circulating among species via contamination of pasture and via predation and have potential to cause illness and reproductive loss. However, I detected no adverse effects on the health of the animals due to infection with these pathogens, and observed no related mortality or illness during my field trips. Hence the deaths of the four snow leopards that were the impetus for my study have not been explained, and monitoring and surveillance of this population should continue.

My findings on wildlife and domestic animal pathogens have relative importance to improving productivity of livestock and the health of the nomadic herders. I recommend improving the health of goats through vaccination and anti-parasite programmes, which will improve their fecundity and survival and thus increase herder income. These programmes will also have flow-on effects to improve the health of the native ungulates that share the grazing areas by decreasing the risk of pathogen transfer between them and also to the snow leopards that prey on them. Demonstrating the importance of herd health may also help mitigate herder wildlife conflict as increased productivity could decrease the perceived importance of predation on herd numbers.

Coxiella burnetii and Leptospires spp are a likely cause of illness in people, despite the lack of reported diagnoses. As rodents had a moderate prevalence of all pathogens tested and inhabit the gers of the local people, it is important to raise awareness of the risk of pathogen transfer to people via rodent excrement contaminating stored food and eating utensils. Risk of human exposure to pathogens during goat slaughter can also be reduced via improved hygiene practices.

By identifying pathogens with broad host ranges in a variety of species in this remote mountainous region, my study provides the basis for understanding health risks to wildlife, domestic animals and humans. Consideration of likely transmission routes for pathogens between species can inform current recommendations to improve health, productivity and hence conservation, of the endangered snow leopard – The Ghost of the Mountain.
 
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  Call Number SLN @ rakhee @ Serial 1744  
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Author Li, J., Lu, Z. url 
  Title Snow Leopard poaching and trade in China 2000- 2013 Type Journal Article
  Year 2014 Publication Biological Conservation Abbreviated Journal  
  Volume Issue 176 Pages 207-211  
  Keywords Bone Pelt, Panthera uncial, Retaliatory killing, Sanjiangyuan  
  Abstract The snow leopard is a flagship species of the alpine ecosystem in the Central Asia, with China comprising

nearly 60% of the habitat and population. It was listed as endangered by IUCN and included in Appendix I

of CITES in the 1970s. Poaching for its fur and bones is a significant and increasing threat to snow leopards

globally. However, little detailed information is available on snow leopard poaching in China. Here,

we collected all reported cases of snow leopard poaching and trade in China 2000–2013. We found that

snow leopard parts were mainly traded in the major cities within their range provinces, but also began to

emerge in a few coastal cities after 2010. Household interviews in the Sanjiangyuan Region in Qinghai

Province showed that in this sub region alone, 11 snow leopards were killed annually, accounting for

about 1.2% of the estimated snow leopard population there.


 
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  Notes Approved no  
  Call Number SLN @ rakhee @ Serial 1412  
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Author Kashkarov, E. url 
  Title ZOOGEOGRAPHICAL DISCOVERIES IN WESTERN BERINGIA Type Journal Article
  Year 2017 Publication Abbreviated Journal  
  Volume Issue Pages 208-217  
  Keywords zoogeographical discoveries, Snow leopard, Irbis, Amur tiger, Irkuyem-bear, global warming, hundred-year rhythm, Beringia, Koryakia, Chukotka.  
  Abstract Among zoogeographical discoveries of the frontier of XXI century there is nothing more interesting

than discoveries of Rodion Sivolobov in Western Beringia. Beringia has surprised us by

paleontological discoveries many centuries ago, and also surprised by modern one. Somehow they

came out of attention of all International environmental foundations and Academies of the world, as

if on purpose to show their professional incompetence. It is the only way to describe the

organization, not to notice the appearance of such big cats as the Snow leopard and Amur tiger for

5,000 kilometers from the border of main range, as well as large Pleistocene relict � the Irkuyembear.

All three endangered species of mammals found by Sivolobov in Koryakia and Chukotka, and

for the snow leopard he took the world's first photo in Beringia.

New facts suggests two things: (1) the ancient refuges of big cats locate to Koryakia and

Chukotka much closer of main ranges, (2) global warming, changing natural environment on the

waves of hundred-year rhythms, periodically pushing irbis and tiger on the ways of ancient

Beringian migrations stored in their genetic memories. Irkuyem is a contemporary of the mammoth.

209

Unlike it, this bear lived up to our days, but remained undetected even by the large “mammoths” of

science.
 
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  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference  
  Notes Approved no  
  Call Number SLN @ rakhee @ Serial 1455  
Permanent link to this record
 

 
Author Alexander, J. S., Shi, K., Tallents, L. A., Riordan, P. url  doi
  Title On the high trail: examining determinants of site use by the Endangered snow leopard Panthera uncia in Qilianshan, China Type Journal Article
  Year 2015 Publication Oryx Abbreviated Journal  
  Volume Issue Fauna & Flora International Pages 1-8  
  Keywords Camera Trap, China, Detection Probability, Occupancy Modelling, Panthera Uncia, Site use, Snow Leopard  
  Abstract Abstract There is a need for simple and robust techniques for assessment and monitoring of populations of the Endangered snow leopard Panthera uncia to inform the de- velopment of action plans for snow leopard conservation. We explored the use of occupancy modelling to evaluate the influence of environmental and anthropogenic features on snow leopard site-use patterns. We conducted a camera trap survey across  km in Gansu Province, China, and used data from  camera traps to estimate probabilities of site use and detection using the single season occupancy model. We assessed the influence of three covariates on site use by snow leopards: elevation, the presence of blue sheep Pseudois nayaur and the presence of human disturb- ance (distance to roads). We recorded  captures of snow leopards over , trap-days, representing a mean capture success of . captures per  trap-days. Elevation had the strongest influence on site use, with the probability of site use increasing with altitude, whereas the influence of presence of prey and distance to roads was relatively weak. Our findings indicate the need for practical and robust tech- niques to appraise determinants of site use by snow leo- pards, especially in the context of the limited resources available for such work.  
  Address  
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  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference  
  Notes Approved no  
  Call Number SLN @ rakhee @ Serial 1433  
Permanent link to this record
 

 
Author Alexander, J. S., Cusack, J. J., Pengju, C, Kun, S., Riordan, P. url 
  Title Conservation of snow leopards: spill-over benefits for other carnivores? Type Journal Article
  Year 2015 Publication Oryx Abbreviated Journal  
  Volume Issue Fauna & Flora International Pages 1-5  
  Keywords China, conservation, Eurasian lynx, grey wolf, red fox, snow leopard  
  Abstract In high-altitude settings of Central Asia the

Endangered snow leopard Panthera uncia has been recognized

as a potential umbrella species. As a first step in assessing

the potential benefits of snow leopard conservation for

other carnivores, we sought a better understanding of the

presence of other carnivores in areas occupied by snow leopards

in China’s Qilianshan National Nature Reserve. We

used camera-trap and sign surveys to examine whether

other carnivores were using the same travel routes as snow

leopards at two spatial scales. We also considered temporal

interactions between species. Our results confirm that other

carnivores, including the red fox Vulpes vulpes, grey wolf

Canis lupus, Eurasian lynx Lynx lynx and dhole Cuon alpinus,

occur along snow leopard travel routes, albeit with low detection

rates. Even at the smaller scale of our camera trap survey

all five carnivores (snow leopard, lynx, wolf, red fox and

dhole) were observed. Kernel density estimates suggested a

high degree of temporal overlap between the snow leopard

and the fox, and the snow leopard and the lynx, as indicated

by high overlap coefficient estimates. There is an opportunity

to consider protective measures at the local scale that would

benefit various species simultaneously. However, it should

also be recognized that snow leopard conservation efforts

could exacerbate human–wildlife conflicts through their protective

effect on other carnivore species.
 
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  Area Expedition Conference  
  Notes Approved no  
  Call Number SLN @ rakhee @ Serial 1434  
Permanent link to this record
 

 
Author Alexander, J. S., Gopalswamy, A. M., Shi, K., Riordan, P. url  doi
  Title Face Value: Towards Robust Estimates of Snow Leopard Densities Type Journal Article
  Year 2015 Publication Plos One Abbreviated Journal  
  Volume Issue Pages  
  Keywords Densities, Snow Leopard, Camera traps, Spatial Capture Recapture models  
  Abstract When densities of large carnivores fall below certain thresholds, dramatic ecological effects

can follow, leading to oversimplified ecosystems. Understanding the population status of

such species remains a major challenge as they occur in low densities and their ranges are

wide. This paper describes the use of non-invasive data collection techniques combined

with recent spatial capture-recapture methods to estimate the density of snow leopards

Panthera uncia. It also investigates the influence of environmental and human activity indicators

on their spatial distribution. A total of 60 camera traps were systematically set up during

a three-month period over a 480 km2 study area in Qilianshan National Nature Reserve,

Gansu Province, China. We recorded 76 separate snow leopard captures over 2,906 trapdays,

representing an average capture success of 2.62 captures/100 trap-days. We identified

a total number of 20 unique individuals from photographs and estimated snow leopard

density at 3.31 (SE = 1.01) individuals per 100 km2. Results of our simulation exercise indicate

that our estimates from the Spatial Capture Recapture models were not optimal to

respect to bias and precision (RMSEs for density parameters less or equal to 0.87). Our

results underline the critical challenge in achieving sufficient sample sizes of snow leopard

captures and recaptures. Possible performance improvements are discussed, principally by

optimising effective camera capture and photographic data quality.
 
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  Series Volume Series Issue Edition  
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  Notes Approved no  
  Call Number SLN @ rakhee @ Serial 1431  
Permanent link to this record
 

 
Author Alexander, J., Chen, P., Damerell, P., Youkui, W., Hughes, J., Shi, K., Riordan, P. url 
  Title Human wildlife conflict involving large carnivores in Qilianshan, China and the minimal paw-print of snow leopards Type Journal Article
  Year 2015 Publication Biological Conservation Abbreviated Journal  
  Volume 187 Issue Pages 1-9  
  Keywords Snow leopard Carnivores Livestock depredation Social attitudes China  
  Abstract In this paper, we assess local perceptions towards snow leopards in North West China using a framework

depicting key conflict domains. We describe the perceived threats posed to humans by the snow leopard

and set them within beliefs and attitudes towards other species within the large carnivore assemblage in

this region. Surveys were conducted in seven villages within Qilianshan National Nature Reserve, Gansu

Province, China, to document reports of snow leopard (Panthera uncia), grey wolf (Canis lupus), Eurasian

lynx (Lynx lynx) and brown bear (Ursus arctos) depredation of livestock, and local attitudes towards each

species. Questionnaire-based interviews were held with 60 households and 49 livestock herders. Herding

of yak, sheep and goats was found to be a common livelihood activity among households in all villages.

Herders reported losing livestock to all four carnivore species. Herders reported that depredation was the

most common event affecting livestock, compared with natural disasters or disease, and represented a

total loss of 3.6% of the livestock population during the previous year. Most (53%) depredation losses were

attributed to lynx, while snow leopards were held responsible for only 7.8% of depredation losses. The

reported impact of snow leopards on herding activities was relatively small and the majority of both

householders and herders expressed positive attitudes towards them and supported measures for their

protection. Households and herders held negative attitudes towards lynx, wolves and bears, however,

most likely due to their perceived threat to livestock and humans. Understanding community perceptions

of threats posed by wildlife is vital for gaining community support for, and engagement in, conflict

mitigation.
 
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  Notes Approved no  
  Call Number SLN @ rakhee @ Serial 1422  
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Author Alexander, S., A., Zhang, C., Shi, K., Riordan, P. url 
  Title A granular view of a snow leopard population using camera traps in Central China Type Journal Article
  Year 2016 Publication Biological Conservation Abbreviated Journal  
  Volume Issue 197 Pages 27-31  
  Keywords Snow leopard Camera trap China Density Monitoring  
  Abstract Successful conservation of the endangered snow leopard (Panthera uncia) relies on the effectiveness of monitoring programmes. We present the results of a 19-month camera trap survey effort, conducted as part of a longterm study of the snow leopard population in Qilianshan National Nature Reserve of Gansu Province, China. Weassessed the minimumnumber of individual snowleopards and population density across different sampling periods using spatial capture–recapture methods. Between 2013–2014, we deployed 34 camera traps across an area of 375 km2, investing a total of 7133 trap-days effort. Weidentified a total number of 17–19 unique individuals

from photographs (10–12 adults, five sub-adults and two cubs). The total number of individuals identified and estimated density varied across sampling periods, between 10–15 individuals and 1.46–3.29 snow leopards per 100 km2 respectively. We demonstrate that snow leopard surveys of limited scale and conducted over short sampling periods only present partial views of a dynamic and transient system.We also underline the challenges in achieving a sufficient sample size of captures and recaptures to assess trends in snow leopard population size and/or density for policy and conservation decision-making
 
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  Series Editor Series Title Abbreviated Series Title  
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  Area Expedition Conference  
  Notes Approved no  
  Call Number SLN @ rakhee @ Serial 1436  
Permanent link to this record
 

 
Author Alexander, J., S., Gopalaswamy, A., M., Shi, K., Hughes, J., Riordan, P. url  doi
  Title Patterns of Snow Leopard Site Use in an Increasingly Human-Dominated Landscape Type Journal Article
  Year 2016 Publication PLoS ONE Abbreviated Journal  
  Volume Issue Pages 1-15  
  Keywords  
  Abstract Human population growth and concomitant increases in demand for natural resources pose threats to many wildlife populations. The landscapes used by the endangered snow leopard (Panthera uncia) and their prey is increasingly subject to major changes in land use. We aimed to assess the influence of 1) key human activities, as indicated by the presence of mining and livestock herding, and 2) the presence of a key prey species, the blue sheep (Pseudois nayaur), on probability of snow leopard site use across the landscape. In Gansu Province, China, we conducted sign surveys in 49 grid cells, each of 16 km2 in size, within a larger area of 3392 km2. We analysed the data using likelihood-based habitat occupancy models that explicitly account for imperfect detection and spatial auto-correlation between survey transect segments. The model-averaged estimate of snow leopard occupancy was high [0.75 (SE 0.10)], but only marginally higher than the naïve estimate (0.67). Snow leop- ard segment-level probability of detection, given occupancy on a 500 m spatial replicate, was also high [0.68 (SE 0.08)]. Prey presence was the main determinant of snow leopard site use, while human disturbances, in the form of mining and herding, had low predictive power. These findings suggest that snow leopards continue to use areas very close to such disturbances, as long as there is sufficient prey. Improved knowledge about the effect of human activity on large carnivores, which require large areas and intact prey populations, is urgently needed for conservation planning at the local and global levels. We highlight a number of methodological considerations that should guide the design of such research.  
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  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference  
  Notes Approved no  
  Call Number SLN @ rakhee @ Serial 1440  
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