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| Author | Esson, C., Samelius, G., Strand, T. M., Lundkvist, A., Michaux, J. R., Rasback, T., Wahab, T., Mijiddorj, T. N., Berger, L., Skerratt, L. F., Low, M. | ||||
| Title | The prevalence of rodent-borne zoonotic pathogens in the South Gobi desert region of Mongolia | Type | Journal Article | ||
| Year | 2023 | Publication | Infection Ecology & Epidemiology | Abbreviated Journal | |
| Volume | 13 | Issue | 2270258 | Pages | 1-10 |
Keywords  |
Rodent; zoonoses; leptospira; hantavirus; haematology; Mongolia | ||||
| Abstract | The alpine ecosystems and communities of central Asia are currently undergoing large-scale ecological and socio-ecological changes likely to affect wildlife-livestock-human disease interactions and zoonosis transmission risk. However, relatively little is known about the prevalence of pathogens in this region. Between 2012 and 2015 we screened 142 rodents in Mongolia’s Gobi desert for exposure to important zoonotic and livestock pathogens. Rodent seroprevalence to Leptospira spp. was>1/3 of tested animals, Toxoplasma gondii and Coxiella burnetii approximately 1/8 animals, and the hantaviruses being between 1/20 (Puumala-like hantavirus) and<1/100 (Seoul-like hantavirus). Gerbils trapped inside local dwellings were one of the species seropositive to Puumala-like hantavirus, suggesting a potential zoonotic transmission pathway. Seventeen genera of zoonotic bacteria were also detected in the faeces and ticks collected from these rodents, with one tick testing positive to Yersinia. Our study helps provide baseline patterns of disease prevalence needed to infer potential transmission between source and target populations in this region, and to help shift the focus of epidemiological research towards understanding disease transmission among species and proactive disease mitigation strategies within a broader One Health framework. | ||||
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| Notes | Approved | no | |||
| Call Number | SLN @ rakhee @ | Serial | 1734 | ||
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| Author | Karnaukhov А. S., Korablev М. P., Kuksin А. N., Malykh S. V., Poyarkov А. D., Spitsyn S. V., Chistopolova М. D., Hernandez-Blanco J. A. | ||||
| Title | Snow Leopard Population Monitoring Guidebook (Russian) | Type | Guidebook | ||
| Year | 2020 | Publication | WWF | Abbreviated Journal | |
| Volume | Issue | Pages | 164 | ||
| Keywords |
Russian | ||||
| Abstract | The “Snow Leopard Population Monitoring Guidebook” is the result of a multiyear effort to study and monitor the status of key snow leopard populations in the Russian Federation conducted by WWF Russia specialists alongside colleagues in protected areas and the Severtsov Institute for Ecology and Evolution (Russian Academy of Sciences). The book provides the most recent data regarding the distribution and population of the snow leopard in three administrative subjects of the Russian Federation – Republics of Altai, Tyva, and Buryatiya. Optimal survey routes and a grid network for camera-trapping stations are discussed and are based on a previously-developed program for standardized monitoring and surveying of the snow leopard population. The most important part of this publication is the analysis of methodologies for evaluating the status of population groups of this rare cat – from the traditional route census approach to innovative systems for automated collection of field data. In addition, the results of multi-year work analyze snow leopard nutrition and evaluate the genetic diversity of the snow leopard population in Russia. | ||||
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| Notes | Approved | no | |||
| Call Number | Serial | 1605 | |||
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| Author | Kichloo, M. A., Sharma, K., Sharma, N. | ||||
| Title | Climate casualties or human disturbance? Shrinking distribution of the three large carnivores in the Greater Himalaya | Type | Journal Article | ||
| Year | 2023 | Publication | Springer – Climatic Change | Abbreviated Journal | |
| Volume | 176 | Issue | 118 | Pages | 1-17 |
| Keywords |
Snow leopard · Common leopard · Asiatic black bear · Climate change · Multi- season occupancy analysis · Local ecological knowledge · Imperfect detection | ||||
| Abstract | Mammalian carnivores are key to our understanding of ecosystem dynamics, but most of them are threatened with extinction all over the world. Conservating large carnivores is often an arduous task considering the complex relationship between humans and carnivores, and the diverse range and reasons of threats they face. Climate change is exacerbating the situation further by interacting with most existing threats and amplifying their impacts. The Mountains of Central and South Asia are warming twice as rapidly as the rest of the northern hemisphere. There has been limited research on the effect of climate change and other variables on large carnivores. We studied the patterns in spatio-temporal distribution of three sympatric carnivores, common leopard, snow leopard, and Asiatic black bear in Kishtwar high altitude National Park, a protected area in the Great Himalayan region of Jammu and Kashmir. We investigated the effects of key habitat characteristics as well as human disturbance and climatic factors to understand the spatio-temporal change in their distributions between the early 1990s and around the year 2016–2017. We found a marked contraction in the distribution of the three carnivores between the two time periods. While snow leopard shifted upwards and further away from human settlements, common leopard and Asiatic black bear suffered higher rates of local extinctions at higher altitudes and shifted to lower areas with more vegetation, even if that brought them closer to settlements. We also found some evidence that snow leopards were less likely to have faced range contraction in areas with permanent glaciers. Our study underscores the importance of climate adaptive conservation practices for long-term management in the Greater Himalaya, including the monitoring of changes in habitat, and space-use patterns by human communities and wildlife. | ||||
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| Notes | Approved | no | |||
| Call Number | SLN @ rakhee @ | Serial | 1724 | ||
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| Author | Bohnett, E., Faryabi, S. P., Lewison, R., An, L., Bian, X., Rajabi, A. M., Jahed, N., Rooyesh, H., Mills, E., Ramos, S., Mesnildrey, N., Perez, C. M. S., Taylor, J., Terentyev, V., Ostrowski, S. | ||||
| Title | Human expertise combined with artificial intelligence improves performance of snow leopard camera trap studies | Type | Journal Article | ||
| Year | 2023 | Publication | Global Ecology & Conservation | Abbreviated Journal | |
| Volume | 41 | Issue | e02350 | Pages | 1-13 |
| Keywords |
Snow leopard, Artificial intelligence, Camera trap misclassification, individual ID, HotSpotter | ||||
| Abstract | Camera trapping is the most widely used data collection method for estimating snow leopard (Panthera uncia) abundance; however, the accuracy of this method is limited by human observer errors from misclassifying individuals in camera trap images. We evaluated the extent Whiskerbook (www.whiskerbook.org), an artificial intelligence (AI) software, could reduce this error rate and enhance the accuracy of capture-recapture abundance estimates. Using 439 images of 34 captive snow leopard individuals, classification was performed by five observers with prior experience in individual snow leopard ID (“experts”) and five observers with no such experience (“novices”). The “expert” observers classified 35 out of 34 snow leopard individuals, on average erroneously splitting one individual into two, thus resulting in a higher number than true individuals. The success rate of experts was 90 %, with less than a 3 % error in estimating the population size in capture-recapture modeling. However, the “novice” observers successfully matched 71 % of encounters, recognizing 25 out of 34 individuals, underestimating the population by 25 %. It was found that expert observers significantly outperformed novice observers, making statistically fewer errors (Mann Whitney U test P = 0.01) and finding the true number of individuals (P = 0.01). These differences were contrasted with a previous study by Johansson et al. 2020, using the same subset of 16 individuals from European zoos. With the help of AI and the Whiskerbook platform, “experts” were able to match 87 % of encounters and identify 15 out of 16 individuals, with modeled estimates of 16 ± 1 individuals. In contrast, “novices” were 63 % accurate in matching encounters and identified 12 out of 16 individuals, modeling 12 ± 1 individuals that underestimated the population size by 12 %. When comparing the performance of observers using AI and the Whiskerbook platform to observers performing the tasks manually, we found that observers using Whiskerbook made significantly fewer errors in splitting one individual into two (P = 0.04). However, there were also a significantly higher number of combination errors, where two individuals were combined into one (P = 0.01). Specifically, combination errors were found to be made by “novices” (P = 0.04). Although AI benefited both expert and novice observers, expert observers outperformed novices. Our results suggest that AI effectively reduced the misclassification of individual snow leopards in camera trap studies, improving abundance estimates. However, even with AI support, expert observers were needed to obtain the most accurate estimates. | ||||
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| Notes | Approved | no | |||
| Call Number | SLN @ rakhee @ | Serial | 1715 | ||
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| Author | Rode, J., Lambert, C., Marescot, L., Chaix, B., Beesau, J., Bastian, S., Kyrbashev, J., Cabanat, A.L. | ||||
| Title | Population monitoring of snow leopards using camera trapping in Naryn State Nature Reserve, Kyrgyzstan, between 2016 and 2019 | Type | Journal Article | ||
| Year | 2021 | Publication | Global Ecology and Conservation | Abbreviated Journal | |
| Volume | 31 | Issue | e01850 | Pages | 1-6 |
| Keywords |
Snow leopard, camera trapping, Citizen science, Kyrgyzstan | ||||
| Abstract | Four field seasons of snow leopard (Panthera uncia) camera trapping inside Naryn State Nature Reserve, Kyrgyzstan, performed thanks to citizen science expeditions, allowed detecting a minimal population of five adults, caught every year with an equilibrated sex ratio (1.5:1) and reproduction: five cubs or subadults have been identified from three litters of two different females. Crossings were observed one to three times a year, in front of most camera traps, and several times a month in front of one of them. Overlap of adults’ minimal territories was observed in front of several camera traps, regardless of their sex. Significant snow leopard presence was detected in the buffer area and at Ulan area which is situated at the reserve border. To avoid poaching on this apex predator and its preys, extending the more stringent protection measures of the core zone to both the Southern buffer area and land adjacent to Ulan is recommended. | ||||
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| Notes | Approved | no | |||
| Call Number | SLN @ rakhee @ | Serial | 1660 | ||
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| Author | Johansson, O., Ullman, K., Lkhagvajav, P., Wiseman, M., Malmsten, J., Leijon, M. | ||||
| Title | Detection and Genetic Characterization of Viruses Present in Free-Ranging Snow Leopards Using Next-Generation Sequencing | Type | Journal Article | ||
| Year | 2020 | Publication | Frontiers in Veterinary Science | Abbreviated Journal | |
| Volume | 7 | Issue | 645 | Pages | 1-9 |
| Keywords |
snow leopard, free-ranging, virome, Mongolia, rectal swabs, next-generating sequencing, Panthera unica | ||||
| Abstract | Snow leopards inhabit the cold, arid environments of the high mountains of South and Central Asia. These living conditions likely affect the abundance and composition of microbes with the capacity to infect these animals. It is important to investigate the microbes that snow leopards are exposed to detect infectious disease threats and define a baseline for future changes that may impact the health of this endangered felid. In this work, next-generation sequencing is used to investigate the fecal (and in a few cases serum) virome of seven snow leopards from the Tost Mountains of Mongolia. The viral species to which the greatest number of sequences reads showed high similarity was rotavirus. Excluding one animal with overall very few sequence reads, four of six animals (67%) displayed evidence of rotavirus infection. A serum sample of a male and a rectal swab of a female snow leopard produced sequence reads identical or closely similar to felid herpesvirus 1, providing the first evidence that this virus infects snow leopards. In addition, the rectal swab from the same female also displayed sequence reads most similar to feline papillomavirus 2, which is the first evidence for this virus infecting snow leopards. The rectal swabs from all animals also showed evidence for the presence of small circular DNA viruses, predominantly Circular Rep-Encoding Single-Stranded (CRESS) DNA viruses and in one case feline anellovirus. Several of the viruses implicated in the present study could affect the health of snow leopards. In animals which are under environmental stress, for example, young dispersing individuals and lactating females, health issues may be exacerbated by latent virus infections. |
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| Notes | Approved | no | |||
| Call Number | Serial | 1612 | |||
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| Author | Rode, J., Pelletier, A., Fumey, J., Rode, S., Cabanat, A. L., Ouvrard, A., Chaix, B., White, B., Harnden, M., Xuan, N. T., Vereshagin, A., Casane, D. | ||||
| Title | Diachronic monitoring of snow leopards at Sarychat-Ertash State Reserve (Kyrgyzstan) through scat genotyping: a pilot study | Type | Journal Article | ||
| Year | 2020 | Publication | bioRxiv | Abbreviated Journal | |
| Volume | Issue | Pages | 1-21 | ||
| Keywords |
snow leopard, noninvasive genotyping, population dynamics, microsatellite, relatedness, diachronic monitoring, citizen science, Central Asia | ||||
| Abstract | Snow leopards (Panthera uncia) are a keystone species of Central Asia’s high mountain ecosystem. The species is listed as vulnerable and is elusive, preventing accurate population assessments that could inform conservation actions. Non-invasive genetic monitoring conducted by citizen scientists offers avenues to provide key data on this species that would otherwise be inaccessible. From 2011 to 2015, OSI-Panthera citizen science expeditions tracked signs of presence of snow leopards along transects in the main valleys and crests of the Sarychat-Ertash State Reserve (Kyrgyzstan). Scat samples were genotyped at seven autosomal microsatellite loci and at a X/Y locus for sex identification, which allowed estimating a minimum of 11 individuals present in the reserve from 2011 to 2015. The genetic recapture of 7 of these individuals enabled diachronic monitoring, providing indications of individuals’ movements throughout the reserve. We found putative family relationships between several individuals. Our results demonstrate the potential of this citizen science program to get a precise description of a snow leopard population through time. | ||||
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| Notes | Approved | no | |||
| Call Number | Serial | 1602 | |||
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| Author | Korablev, M. P., Poyarkov, A. D., Karnaukhov, A. S., Zvychaynaya, E. Y., Kuksin, A. N., Malykh, S. V., Istomov, S. V., Spitsyn, S. V., Aleksandrov, D. Y., Hernandez-Blanco, J. A., Munkhtsog, B., Munkhtogtokh, O., Putintsev, N. I., Vereshchagin, A. S., Becmurody, A., Afzunov, S., Rozhnov, V. V. | ||||
| Title | Large-scale and fine-grain population structure and genetic diversity of snow leopards (Panthera uncia Schreber, 1776) from the northern and western parts of the range with an emphasis on the Russian population. | Type | Journal Article | ||
| Year | 2021 | Publication | Conservation Genetics | Abbreviated Journal | |
| Volume | Issue | Pages | |||
| Keywords |
Snow leopard, Panthera uncia, Microsatellites, Heterozygosity, Population structure, Noninvasive survey, Scat, Subspecies | ||||
| Abstract | The snow leopard (Panthera uncia Schreber, 1776) population in Russia and Mongolia is situated at the northern edge of the range, where instability of ecological conditions and of prey availability may serve as prerequisites for demographic instability and, consequently, for reducing the genetic diversity. Moreover, this northern area of the species distribution is connected with the western and central parts by only a few small fragments of potential habitats in the Tian-Shan spurs in China and Kazakhstan. Given this structure of the range, the restriction of gene flow between the northern and other regions of snow leopard distribution can be expected. Under these conditions, data on population genetics would be extremely important for assessment of genetic diversity, population structure and gene flow both at regional and large-scale level. To investigate large-scale and fine-grain population structure and levels of genetic diversity we analyzed 108 snow leopards identified from noninvasively collected scat samples from Russia and Mongolia (the northern part of the range) as well as from Kyrgyzstan and Tajikistan (the western part of the range) using panel of eight polymorphic microsatellites. We found low to moderate levels of genetic diversity in the studied populations. Among local habitats, the highest heterozygosity and allelic richness were recorded in Kyrgyzstan (He = 0.66 ± 0.03, Ho = 0.70 ± 0.04, Ar = 3.17) whereas the lowest diversity was found in a periphery subpopulation in Buryatia Republic of Russia (He = 0.41 ± 0.12, Ho = 0.29 ± 0.05, Ar = 2.33). In general, snow leopards from the western range exhibit greater genetic diversity (He = 0.68 ± 0.04, Ho = 0.66 ± 0.03, Ar = 4.95) compared to those from the northern range (He = 0.60 ± 0.06, Ho = 0.49 ± 0.02, Ar = 4.45). In addition, we have identified signs of fragmentation in the northern habitat, which have led to significant genetic divergence between subpopulations in Russia. Multiple analyses of genetic structure support considerable genetic differentiation between the northern and western range parts, which may testify to subspecies subdivision of snow leopards from these regions. The observed patterns of genetic structure are evidence for delineation of several management units within the studied populations, requiring individual approaches for conservation initiatives, particularly related to translocation events. The causes for the revealed patterns of genetic structure and levels of genetic diversity are discussed. | ||||
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| Notes | Approved | no | |||
| Call Number | Serial | 1633 | |||
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| Author | Zhang, L., Lian, X., Yang, X | ||||
| Title | Population density of snow leopards (Panthera Uncia) in the Yage Valley Region of the Sanjiangyuan National Park: Conservation Implications and future directions | Type | Journal Article | ||
| Year | 2020 | Publication | Artic, Antartic and Alpine Research | Abbreviated Journal | |
| Volume | 52 | Issue | 1 | Pages | 541-550 |
| Keywords |
Snow leopard; population density; camera trapping; Tibetan Plateau; alpine ecosystem | ||||
| Abstract | Population-based studies on snow leopard (Panthera uncia) are of theoretical and practical sig- nificance for the conservation of alpine ecosystems, though geographic remoteness and isolation hinder surveys in many promising regions. The Sanjiangyuan National Park on the Tibetan Plateau is acknowledged as a main snow leopard habitat, but most of the region remains unexplored and unknown. We adopted a combined approach of route survey and camera trapping survey to explore the population density of snow leopard in the Yage Valley region of the Sanjiangyuan National Park. Results indicated that (1) large populations of blue sheep contributed to the major food supply for snow leopards, along with diverse prey species as dietary supplementations, and (2) a population density of four to six snow leopards per 100 km2 on the north bank was estimated, and nine to fourteen individuals within the valley core areas were identified. We also argue that under the potential impacts of hydropower dams, this valley ecosystem should be symbolized as a conservation hotspot and therefore merits prioritized conservation. We recommend further surveys combined with novel methods/techniques and advocate a sustainable ecotourism model for the first V-shaped valley along the Yangtze mainstream. | ||||
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| Notes | Approved | no | |||
| Call Number | Serial | 1619 | |||
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| Author | Esson, C. , Skerratt, L. F. , Berger, L. , Malmsten, J., Strand, T. , Lundkvist, A., Järhult, J. D., Michaux, J., Mijiddorj, T. N., , Bayrakçısmith, R., Mishra, C., Johansson, O | ||||
| Title | Health and zoonotic Infections of snow leopards Panthera unica in the South Gobi desert of Mongolia | Type | Journal Article | ||
| Year | 2019 | Publication | Infection Ecology & Epidemiology | Abbreviated Journal | |
| Volume | 9 | Issue | 1604063 | Pages | 1-11 |
| Keywords |
Snow leopard; zoonoses; conservation; one health; Mongolia; ticks | ||||
| Abstract | Background: Snow leopards, Panthera uncia, are a threatened apex predator, scattered across the mountains of Central and South Asia. Disease threats to wild snow leopards have not been investigated. Methods and Results: Between 2008 and 2015, twenty snow leopards in the South Gobi desert of Mongolia were captured and immobilised for health screening and radio-collaring. Blood samples and external parasites were collected for pathogen analyses using enzyme- linked immunosorbent assay (ELISA), microscopic agglutination test (MAT), and next- generation sequencing (NGS) techniques. The animals showed no clinical signs of disease, however, serum antibodies to significant zoonotic pathogens were detected. These patho- gens included, Coxiella burnetii, (25% prevalence), Leptospira spp., (20%), and Toxoplasma gondii (20%). Ticks collected from snow leopards contained potentially zoonotic bacteria from the genera Bacillus, Bacteroides, Campylobacter, Coxiella, Rickettsia, Staphylococcus and Streptococcus. Conclusions: The zoonotic pathogens identified in this study, in the short-term did not appear to cause illness in the snow leopards, but have caused illness in other wild felids. Therefore, surveillance for pathogens should be implemented to monitor for potential longer- term disease impacts on this snow leopard population. |
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| Notes | Approved | no | |||
| Call Number | Serial | 1625 | |||
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