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Janjua, S., Peters, J. L., Weckworth, B., Abbas, F. I., Bahn, Volker, Johansson, O., Rooney, T.P. (2019). Improving our conservation genetic toolkit: ddRAD-seq for SNPs in snow leopards. Conservation Genetic Resource, .
Abstract: Snow leopards (Panthera uncia) are an enigmatic, high-altitude species whose challenging habitat, low population densities
and patchy distribution have presented challenges for scientists studying its biology, population structure, and genetics.
Molecular scatology brings a new hope for conservation efforts by providing valuable insights about snow leopards, including
their distribution, population densities, connectivity, habitat use, and population structure for assigning conservation units.
However, traditional amplification of microsatellites from non-invasive sources of DNA are accompanied by significant
genotyping errors due to low DNA yield and poor quality. These errors can lead to incorrect inferences in the number of
individuals and estimates of genetic diversity. Next generation technologies have revolutionized the depth of information
we can get from a species' genome. Here we used double digest restriction-site associated DNA sequencing (ddRAD-seq),
a well-established technique for studying non-model organisms, to develop a reference sequence library for snow leopards
using blood samples from five Mongolian individuals. Our final data set reveals 4504 loci with a median size range of 221 bp.
We identified 697 SNPs and low nucleotide diversity (0.00032) within these loci. However, the probability that two random
individuals will share identical genotypes is about 10-168. We developed probes for DNA capture using this sequence library
which can now be used for genotyping individuals from scat samples. Genetic data from ddRAD-seq will be invaluable for
conducting population and landscape scale studies that can inform snow leopard conservation strategies.
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Farhadinia, M. S., Maheshwari, A., Nawaz, M. A., Ambarli, H., Gritsina, M. A., Koshkin, M. A., Rosen, T., Hinsley, A., Macdonald, D. W. (2019). Belt and Road Initiative may create new supplies for illegal wildlife trade in large carnivores.
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Garget, J. Living with a predator.
Abstract: Why understanding local attitudes is vital for successful snow leopard conservation.
Published in the University of Cambridge Website.
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Planning Wildlife Conservation in Leh and Kargil Districts of Ladakh, J. and K. (1999). Establising Snow Leopard Information Management System (SLIMS) at WII Phase 1 – Trans Himalaya.
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Karnaukhov А. S., K. М. P., Kuksin А. N., Malykh S. V., Poyarkov А. D., Spitsyn S. V., Chistopolova М. D., Hernandez-Blanco J. A. (2020). Snow Leopard Population Monitoring Guidebook (English).
Abstract: The “Snow Leopard Population Monitoring Guidebook” is the result of a multiyear effort to study and monitor the status of key snow leopard populations in the Russian Federation conducted by WWF Russia specialists alongside colleagues in protected areas and the Severtsov Institute for Ecology and Evolution (Russian Academy of Sciences). The book provides the most recent data regarding the distribution and population of the snow leopard in three administrative subjects of the Russian Federation – Republics of Altai, Tyva, and Buryatiya. Optimal survey routes and a grid network for camera-trapping stations are discussed and are based on a previously-developed program for standardized monitoring and surveying of the snow leopard population. The most important part of this publication is the analysis of methodologies for evaluating the status of population groups of this rare cat – from the traditional route census approach to innovative systems for automated collection of field data. In addition, the results of multi-year work analyze snow leopard nutrition and evaluate the genetic diversity of the snow leopard population in Russia.
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Karnaukhov А. S., K. М. P., Kuksin А. N., Malykh S. V., Poyarkov А. D., Spitsyn S. V., Chistopolova М. D., Hernandez-Blanco J. A. (2020). Snow Leopard Population Monitoring Guidebook (Russian).
Abstract: The “Snow Leopard Population Monitoring Guidebook” is the result of a multiyear effort to study and monitor the status of key snow leopard populations in the Russian Federation conducted by WWF Russia specialists alongside colleagues in protected areas and the Severtsov Institute for Ecology and Evolution (Russian Academy of Sciences). The book provides the most recent data regarding the distribution and population of the snow leopard in three administrative subjects of the Russian Federation – Republics of Altai, Tyva, and Buryatiya. Optimal survey routes and a grid network for camera-trapping stations are discussed and are based on a previously-developed program for standardized monitoring and surveying of the snow leopard population. The most important part of this publication is the analysis of methodologies for evaluating the status of population groups of this rare cat – from the traditional route census approach to innovative systems for automated collection of field data. In addition, the results of multi-year work analyze snow leopard nutrition and evaluate the genetic diversity of the snow leopard population in Russia.
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Pal, R., Bhattacharya, T., Sathyakumar, S. (2020). Woolly flying squirrel Eupetaurus Cinereus: A new addition to the diet of snow leopard Panthera Uncia (Vol. 117).
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Johansson, O., Ausilio, G., Low, M., Lkhagvajav, P., Weckworth,
B., Sharma, K. (2020). The timing of breeding and independence for snow leopard females
and their cubs. Mammalian Biology, .
Abstract: Significant knowledge gaps persist on snow leopard demography
and reproductive behavior. From a GPS-collared population in Mongolia,
we estimated the timing of mating, parturition and independence. Based
on three mother–cub pairs, we describe the separation phase of the cub
from its mother as it gains independence. Snow leopards mated from
January–March and gave birth from April–June. Cubs remained with their
mother until their second winter (20–22 months of age) when cubs started
showing movements away from their mother for days at a time. This
initiation of independence appeared to coincide with their mother mating
with the territorial male. Two female cubs remained in their mothers’
territory for several months after initial separation, whereas the male
cub quickly dispersed. By comparing the relationship between body size
and age of independence across 11 solitary, medium-to-large felid
species, it was clear that snow leopards have a delayed timing of
separation compared to other species. We suggest this may be related to
their mating behavior and the difficulty of the habitat and prey capture
for juvenile snow leopards. Our results, while limited, provide
empirical estimates for understanding snow leopard ecology and for
parameterizing population models.
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Alexander, J. S., Agvaantseren, B., Gongor, E., Mijiddorj, T. N., Piaopiao, T., Stephen Redpath, S., Young, J., Mishra, C. (2021). Assessing the Effectiveness of a Community-based Livestock Insurance Program. Environmental Management, .
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Korablev, M. P., Poyarkov, A. D., Karnaukhov, A. S., Zvychaynaya, E. Y., Kuksin, A. N., Malykh, S. V., Istomov, S. V., Spitsyn, S. V., Aleksandrov, D. Y., Hernandez-Blanco, J. A., Munkhtsog, B., Munkhtogtokh, O., Putintsev, N. I., Vereshchagin, A. S., Becmurody, A., Afzunov, S., Rozhnov, V. V. (2021). Large-scale and fine-grain population structure and genetic diversity of snow leopards (Panthera uncia Schreber, 1776) from the northern and western parts of the range with an emphasis on the Russian population. Conservation Genetics, .
Abstract: The snow leopard (Panthera uncia Schreber, 1776) population in Russia and Mongolia is situated at the northern edge of the range, where instability of ecological conditions and of prey availability may serve as prerequisites for demographic instability and, consequently, for reducing the genetic diversity. Moreover, this northern area of the species distribution is connected with the western and central parts by only a few small fragments of potential habitats in the Tian-Shan spurs in China and Kazakhstan. Given this structure of the range, the restriction of gene flow between the northern and other regions of snow leopard distribution can be expected. Under these conditions, data on population genetics would be extremely important for assessment of genetic diversity, population structure and gene flow both at regional and large-scale level. To investigate large-scale and fine-grain population structure and levels of genetic diversity we analyzed 108 snow leopards identified from noninvasively collected scat samples from Russia and Mongolia (the northern part of the range) as well as from Kyrgyzstan and Tajikistan (the western part of the range) using panel of eight polymorphic microsatellites. We found low to moderate levels of genetic diversity in the studied populations. Among local habitats, the highest heterozygosity and allelic richness were recorded in Kyrgyzstan (He = 0.66 ± 0.03, Ho = 0.70 ± 0.04, Ar = 3.17) whereas the lowest diversity was found in a periphery subpopulation in Buryatia Republic of Russia (He = 0.41 ± 0.12, Ho = 0.29 ± 0.05, Ar = 2.33). In general, snow leopards from the western range exhibit greater genetic diversity (He = 0.68 ± 0.04, Ho = 0.66 ± 0.03, Ar = 4.95) compared to those from the northern range (He = 0.60 ± 0.06, Ho = 0.49 ± 0.02, Ar = 4.45). In addition, we have identified signs of fragmentation in the northern habitat, which have led to significant genetic divergence between subpopulations in Russia. Multiple analyses of genetic structure support considerable genetic differentiation between the northern and western range parts, which may testify to subspecies subdivision of snow leopards from these regions. The observed patterns of genetic structure are evidence for delineation of several management units within the studied populations, requiring individual approaches for conservation initiatives, particularly related to translocation events. The causes for the revealed patterns of genetic structure and levels of genetic diversity are discussed.
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