Abstract: The Pallas’s cat (Otocolobus manul) is one of the most understudied taxa in the Felidae family. The species is currently assessed as being of “Least Concern” in the IUCN Red List, but this assessment is based on incomplete data. Additional ecological and genetic information is necessary for the long-term in situ and ex situ conservation of this species. We identified 29 microsatellite loci with sufficient diversity to enable studies into the individual identification, population structure, and phylogeography of Pallas’s cats. These microsatellites were genotyped on six wild Pallas’s cats from the Tibet Autonomous Region and Mongolia and ten cats from a United States zoo-managed population that originated in Russia and Mongolia. Additionally, we examined diversity in a 91 bp segment of the mitochondrial 12S ribosomal RNA (MT-RNR1) locus and a hypoxia-related gene, endothelial PAS domain protein 1 (EPAS1). Based on the microsatellite and MT-RNR1 loci, we established that the Pallas’s cat displays moderate genetic diversity. Intriguingly, we found that the Pallas’s cats had one unique nonsynonymous substitution in EPAS1 not present in snow leopards (Panthera uncia) or domestic cats (Felis catus). The analysis of the zoo-managed population indicated reduced genetic diversity compared to wild individuals. The genetic information from this study is a valuable resource for future research into and the conservation of the Pallas’s cat.

Abstract: In the 1960s, the endangered snow leopard was locally extirpated from the Sagarmatha (Mt. Everest) region of Nepal. In this Sherpa-inhabited high Himalaya, the flourishing tourism since the ascent of Mt Everest in 1953, has caused both prosperity and adverse impacts, the concern that catalyzed the establishment of Mt. Everest National Park in the region in 1976. In the late 1980s, there were reports that some transient snow leopards may have visited the area from adjoining Tibet, but no biological surveys exist to confirm the status of the cats and their prey. Have snow leopards finally returned to the top of the world? Exploring this question was the main purpose of this research project. We systematically walked altogether 24 sign transects covering over 13 km in length in three valleys, i.e. Namche, Phortse and Gokyo, of the park, and counted several snow leopard signs. The results indicated that snow leopards have made a comeback in the park in response to decades of protective measures, the virtual cessation of hunting and the recovery of the Himalayan tahr which is snow leopard's prey. The average sign density (4.2 signs/km and 2.5 sign sites/km) was comparable to that reported from other parts of the cats' range in the Himalaya. On this basis, we estimated the cat density in the Everest region between 1 to 3 cats per 100 sq km, a figure that was supported by different sets of pugmarks and actual sightings of snow leopards in the 60 km2 sample survey area. In the study area, tahr population had a low reproductive rate (e.g. kids-to-females ratio, 0.1, in Namche). Since predators can influence the size and the structure of prey species populations through mortality and through non-lethal effects or predation risk, snow leopards could have been the cause of the population dynamics of tahr in Sagarmtha, but this study could not confirm this speculation for which further probing may be required.

Abstract: Mountain ungulates perform a key role in maintaining the balance of ecosystems as they are the primary consumers of vegetation and prey for large predators. The mountain ranges of northern Pakistan are home to six species of mountain ungulates, and the Himalayan ibex (Capra sibirica), hereafter ibex, is the most abundant among them. This study was conducted in three administrative regions of northern Pakistan, viz. Gilgit-Baltistan (GB), Azad Jammu and Kashmir (AJK), and Khyber Pakhtunkhwa (KP), to generate a range-wide density pattern map of ibex. A double-observer survey was conducted in 25 study sites during 2018–2021 across the ibex distribution range, covering an area of about 35,307 km2, by walking transects totaling 1647 km. Within the ibex range where the survey was not conducted due to financial and logistical constraints, we obtained species population information from local wildlife departments’ most recent annual survey data. The aim was to generate a density map for the entire ibex range. Using the BBRe-capture package in program R, we estimated an ibex population of 7639 (95 % CI) with a mean density of 0.21/km2 in the surveyed area. Combining with the secondary data from un-surveyed areas, the total population estimate for the country came to 10,242 ibex. The largest population densities were observed in four valleys (Shimshal, Gulkin-Hussaini, Khyber, and Khunjerab) of the Karakoram-Pamir range, followed by the Hindu Kush range (Chitral Wildlife Division [WD]). The central and eastern parts of the Karakoram range had moderate to low densities, while the Himalayan range (e.g., Astore Valley) supported a small population. The mean herd size was 15 individuals (range: 5–41), and the average detection probability of observers A and B was 0.69 and 0.48, respectively. The average male and young ratios per 100 females were estimated to be 75 and 81, respectively. The range-wide density map developed during the study provided an evidence for the impact of trophy hunting programs and an objective tool for range-wide conservation planning of the species.

Abstract: Spatial capture–recapture (SCR) methods use the location of
detectors (camera traps, hair snares and live-capture traps) and the
locations at which animals were detected (their spatial capture
histories) to estimate animal density. Despite the often large expense
and effort involved in placing detectors in a landscape, there has been
relatively little work on how detectors should be located. A natural
criterion is to place traps so as to maximize the precision of density
estimators, but the lack of a closed-form expression for precision has
made optimizing this criterion computationally demanding. 2. Recent
results by Efford and Boulanger (2019) show that precision can be well
approximated by a function of the expected number of detected
individuals and expected number of recapture events, both of which can
be evaluated at low computational cost. We use these results to develop
a method for obtaining survey designs that optimize this approximate
precision for SCR studies using count or binary proximity detectors, or
multi-catch traps. 3. We show how the basic design protocol can be
extended to incorporate spatially varying distributions of activity
centres and animal detectability. We illustrate our approach by
simulating from a camera trap study of snow leopards in Mongolia and
comparing estimates from our designs to those generated by regular or
optimized grid designs. Optimizing detector placement increased the
number of detected individuals and recaptures, but this did not always
lead to more precise density estimators due to less precise estimation
of the effective sampling area. In most cases, the precision of density
estimators was comparable to that obtained with grid designs, with
improvement in some scenarios where approximate CV(¬D) < 20% and density
varied spatially. 4. Designs generated using our approach are
transparent and statistically grounded. They can be produced for survey
regions of any shape, adapt to known information about animal density
and detectability, and are potentially easier and less costly to
implement. We recommend their use as good, flexible candidate designs
for SCR surveys when reasonable knowledge of model parameters exists. We
provide software for researchers to construct their own designs, in the
form of updates to design functions in the r package oSCR.

Abstract: Predators have significant ecological impacts on the region's prey-predator dynamic and community structure through their numbers and prey selection. During April-December 2007, I conducted a research in Sagarmatha (Mt. Everest) National Park (SNP) to: i) explore population status and density of wild prey species; Himalayan tahr, musk deer and game birds, ii) investigate diet of the snow leopard and to estimate prey selection by snow leopard, iii) identify the pattern of livestock depredation by snow leopard, its mitigation, and raise awareness through outreach program, and identify the challenge and opportunities on conservation snow leopard and its co-existence with wild ungulates and the human using the areas of the SNP. Methodology of my research included vantage points and regular monitoring from trails for Himalayan tahr, fixed line transect with belt drive method for musk deer and game birds, and microscopic hair identification in snow leopard's scat to investigate diet of snow leopard and to estimate prey selection. Based on available evidence and witness accounts of snow leopard attack on livestock, the patterns of livestock depredation were assessed. I obtained 201 sighting of Himalayan tahr (1760 individuals) and estimated 293 populations in post-parturient period (April-June), 394 in birth period (July -October) and 195 November- December) in rutting period. In average, ratio of male to females was ranged from 0.34 to 0.79 and ratio of kid to female was 0.21-0.35, and yearling to kid was 0.21- 0.47. The encounter rate for musk deer was 1.06 and density was 17.28/km2. For Himalayan monal, the encounter rate was 2.14 and density was 35.66/km2. I obtained 12 sighting of snow cock comprising 69 individual in Gokyo. The ratio of male to female was 1.18 and young to female was 2.18. Twelve species (8 species of wild and 4 species of domestic livestock) were identified in the 120 snow leopard scats examined. In average, snow leopard predated most frequently on Himalayan tahr and it was detected in 26.5% relative frequency of occurrence while occurred in 36.66% of all scats, then it was followed by musk deer (19.87%), yak (12.65%), cow (12.04%), dog (10.24%), unidentified mammal (3.61%), woolly hare (3.01%), rat sp. (2.4%), unidentified bird sp. (1.8%), pika (1.2%), and shrew (0.6%) (Table 5.8 ). Wild species were present in 58.99% of scats whereas domestic livestock with dog were present in 40.95% of scats. Snow leopard predated most frequently on wildlife species in three seasons; spring (61.62%), autumn (61.11%) and winter (65.51%), and most frequently on domestic species including dog in summer season (54.54%). In term of relative biomass consumed, in average, Himalayan tahr was the most important prey species contributed 26.27% of the biomass consumed. This was followed by yak (22.13%), cow (21.06%), musk deer (11.32%), horse (10.53%), wooly hare (1.09%), rat (0.29%), pika (0.14%) and shrew (0.07%). In average, domestic livestock including dog were contributed more biomass in the diet of snow leopard comprising 60.8% of the biomass consumed whilst the wild life species comprising 39.19%. The annual prey consumption by a snow leopard (based on 2 kg/day) was estimated to be three Himalayan tahr, seven musk deer, five wooly hare, four rat sp., two pika, one shrew and four livestock. In the present study, the highest frequency of attack was found during April to June and lowest to July to November. The day of rainy and cloudy was the more vulnerable to livestock depredation. Snow leopard attacks occurred were the highest at near escape cover such as shrub land and cliff. Both predation pressure on tahr and that on livestock suggest that the development of effective conservation strategies for two threatened species (predator and prey) depends on resolving conflicts between people and predators. Recently, direct control of free – ranging livestock, good husbandry and compensation to shepherds may reduce snow leopard – human conflict. In long term solution, the reintroduction of blue sheep at the higher altitudes could also “buffer” predation on livestock.