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Johnson, W. E., Eizirik, E., Pecon-Slattery, J., Murphy, W. J., Antunes, A., Teeling, E., et al. (2006). The Late Miocene Radiation of Modern Felidae: A Genetic Assessment (Vol. 311).
Abstract: Modern felid species descend from relatively recent (G11 million years ago) divergence and speciation events that produced successful predatory carnivores worldwide but that have confounded taxonomic classifications. A highly resolved molecular phylogeny with divergence dates for all living cat species, derived from autosomal, X-linked, Y-linked, and mitochondrial gene segments (22,789 base pairs) and 16 fossil calibrations define eight principal lineages produced through at least 10 intercontinental migrations facilitated by sea-level fluctuations. A ghost lineage analysis indicates that available felid fossils underestimate (i.e., unrepresented basal branch length) first occurrence by an average of 76%, revealing a low representation of felid lineages in paleontological remains. The phylogenetic performance of distinct gene classes showed that Y-chromosome segments are appreciably more informative than mitochondrial DNA, X-linked, or autosomal genes in resolving the rapid Felidae species radiation.
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Johnson, W. E., Dratch, P. A., Martenson, J. S., & O'Brien, S. J. (1996). Resolution of recent radiations within three evolutionary lineages of Felidae using mitochondrial restriction fragment length polymorphism variation. Journal of Mammalian Evolution, 3(2), 97–120.
Abstract: Patterns of mitochondrial restriction fragment length polymorphism (RFLP) variation were used to resolve more recent relationships among the species of the Felidae ocelot lineage, domestic cat lineage, and pantherine lineage. Twenty-five of 28 restriction enzymes revealed site variation in at least 1 of 21 cat species. The ocelot lineage was resolved into three separate sister taxa groups: Geoffroy's cat (Oncifelis geoffroyi) and kodkod (O. guigna), ocelot (Leopardus pardalis) and margay (L. wiedii), and pampas cat (Lynchailurus colocolo) and most of the tigrina samples (Leopardus tigrina). Within the domestic cat lineage, domestic cat (Felis catus), European wild cat (F. silvestris), and African wild cat (F. libyca) formed a monophyletic trichotomy, which was joined with sand cat (F. margarita) to a common ancestor. Jungle cat (F. chaus) and black-footed cat (F. nigripes) mtDNAs diverged earlier than those of the other domestic cat lineage species and are less closely related. Within the pantherine lineage, phylogenetic analysis identified two distinct groups, uniting lion (P. leo) with leopard (P. pardus) and tiger (P. tigris) with snow leopard (P. uncia).
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Johnson, D. (1994). The National Fish and Wildlife Foundation goes international. Endangered Species Update, A, 11(10), A10.
Abstract: Abstract: The National Fish and Wildlife Foundation (NFWF) which is a conservation organization created in 1984 aims to conserve the species on an international context before they are endangered which will enable a more effective conservation procedure. The NFWF has addressed the causes of endangered species in India and South Asia such as the tiger, Indian wolf and the snow leopard and has supported the conservation efforts of the Siberian tiger. It has cooperated with multi-national organizations to evaluate the best strategy that could be adopted to prevent a future extinction of several species and has supported CITES programs
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Johnsingh, A. J. T. (1983). Large Mammalian predator-prey in Bandipur. J.Bombay Nat.Hist.Soc., 80.
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Johnsingh, A. J. T. (2006). A roadmap for conservation in Uttaranchal.
Abstract: The enchanting state of Uttaranchal, carved out of Uttar Pradesh on 9th November 2000, has a total area of ca. 53,485 km2 with a population density of 160 persons/ km2, much lower than the national average of 324/km2. This young state can take pride in the fact that 13.42% of its area is under protected areas. The state has varied landscapes: snow-capped and conifer forest covered mountains in the north, forest covered foothills with numerous perennial rivers and streams, locally known as the bhabar tract which includes the Himalayan foothills and the Shivalik range. As a result, the land is home to a variety of fascinating wildlife such as the golden mahseer (Tor putitora), king cobra (Ophiophagus hanna), Himalayan monal (Lophophorus impejanus), great hornbill (Buceros bicornis), Himalayan tahr (Hemitragus jemlahicus), bharal (Pseudois nayaur), Himalayan musk deer (Moschus chrysogaster), goral (Nemorhaedus goral), elephant (Elephas maximus), snow leopard (Panthera uncia), leopard (P. pardus), black bear (Ursus thibetanus), and tiger (P. tigris). All across their range, most of these species are endangered. The potential of this state, with about 800 kilometers of riverine habitat, can only be surpassed by Arunachal Pradesh in terms of golden mahseer conservation. The mountains, bedecked with the scarlet flowers of rhododendron (Rhododendron arboreum) in the summer months, can be a veritable home to many forms of pheasants, mountain ungulates and carnivores, provided poaching for trade is eliminated and hunting for the pot is brought under control. The bhabar forests of this state, ca. 7,500 km2, extending between Yamuna and Sharda rivers (Fig. 1.), can easily support a population of about 1000 elephants and 200 tigers as long as this large habitat, now fragmented in three blocks, is managed and protected as one continuous habitat for wildlife. Six villages, gujjar settlements and encroachments need to be moved away from the main wildlife habitat which goes along the bhabar tract. Although the conservation of these habitats can eventually bring in immense benefits through well-planned ecotourism programmes that are rapidly catching up in the state, initial conservation efforts would need a substantial amount of funds.
Keywords: carnivores, conservation, forest, habitat, hunting, landscape, Panthera uncia, poaching, snow leopard, species, tiger, Uncia uncia, ungulates, Uttar Pradesh, Uttaranchal
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Johansson, T., A. Johansson, Orjan. McCarthy, Tom. (2011). An Automatic VHF Transmitter Monitoring System for Wildlife Research. Wildlife Society Bulletin, 9999, 1–5.
Abstract: We describe an automated system for monitoring multiple very high frequency (VHF) transmitters, which are commonly employed in wildlife studies. The system consists of a microprocessor-controlled radio-frequency monitor equipped with advanced signal-processing capabilities that communicates with, and relays information to, a user interface unit at a different location. the system was designed for a capture-and-release snow leopard (Panthera uncia) study in Mongolia, where checking trap-site transmitters manually entailed climbing a hill with telemetry equipment several times each day and night. Here, it monitors the trap-site transmitters and actively produces an alarm when any of the traps have been triggered, or if the system has lost contact with any trap-transmitter. The automated system allowed us to constantly monitor transmitters from a research camp, and alerted us each time a trap was triggered. The system has been field-tested for 83 days from mid-September 2010 to mid-december 2010 in the Tost mountain range on the edge of Mongolia's Gobi desert. During this time, the system performed reliably, responding correctly to 45 manually generated alarms and 9 animal captures. The system considerably shortens the time the captured animals spend in traps, and also mitigates the need for manual trap-site transmitter monitoring, greatly reducing risk to the animal and the human effort involved.
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Johansson, T., A. Johansson, Orjan. McCarthy, Tom. (2011). An Automatic VHF Transmitter Monitoring System for Wildlife Research. Wildlife Society Bulletin, 35((4)), 489–493.
Abstract: We describe an automated system for Monitoring multiple very high frequency (VHF) transmitters, which are commonly employed in wildlife studies. The system consists of a microprocessor-controlled radio-frequency monitor equipped with advanced signal-processing capabilities that communicates with, and release snow leopard (Panthera uncia) study in Mongolia, where checking trap-site transmitters manually entailed climbing a hill with telemetry equipment several times each day and night. Here, it monitors the trap site transmitters and actively produces an alarm when any of the traps have been triggered, or if the system has lost contact with any trap-transmitter. The automated system allowed us to constantly monitor transmitters from a research camp, and alerted us each time a trap was triggered. The sys ten has been field-tested for 83 days from mid-September 2010 to mid- December 2010 in the Tost mountain range on the edge of Mongolia's Gobi desert. During this time, the system performed reliably, responding correctly to 45 manually generated alarms and 9 animal captures. The system considerably sorters the time the captured animals spend in traps, and also mitigates the need for manual trap-site transmitter monitoring, greatly reducing risk to the animal and the human effort involved.
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Johansson, O., Ullman, K., Lkhagvajav, P., Wiseman, M.,
Malmsten, J., Leijon, M. (2020). Detection and Genetic Characterization of Viruses Present in
Free-Ranging Snow Leopards Using Next-Generation Sequencing. Frontiers in Veterinary Science, 7(645), 1–9.
Abstract: Snow leopards inhabit the cold, arid environments of the high
mountains of South and Central Asia. These living conditions likely
affect the abundance and composition of microbes with the capacity to
infect these animals. It is important to investigate the microbes that
snow leopards are exposed to detect infectious disease threats and
define a baseline for future changes that may impact the health of this
endangered felid. In this work, next-generation sequencing is used to
investigate the fecal (and in a few cases serum) virome of seven snow
leopards from the Tost Mountains of Mongolia. The viral species to which
the greatest number of sequences reads showed high similarity was
rotavirus. Excluding one animal with overall very few sequence reads,
four of six animals (67%) displayed evidence of rotavirus infection. A
serum sample of a male and a rectal swab of a female snow leopard
produced sequence reads identical or closely similar to felid
herpesvirus 1, providing the first evidence that this virus infects snow
leopards. In addition, the rectal swab from the same female also
displayed sequence reads most similar to feline papillomavirus 2, which
is the first evidence for this virus infecting snow leopards. The rectal
swabs from all animals also showed evidence for the presence of small
circular DNA viruses, predominantly Circular Rep-Encoding
Single-Stranded (CRESS) DNA viruses and in one case feline anellovirus.
Several of the viruses implicated in the present study could affect the
health of snow leopards. In animals which are under environmental
stress, for example, young dispersing individuals and lactating females,
health issues may be exacerbated by latent virus infections.
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Johansson, O., Samelius, G., Wikberg, E, Chapron, G., Mishra, C., Low, M. (2020). Identification errors in camera- trap studies result in systematic population overestimation. Scientific Reports, 10(6393), 1–10.
Abstract: Reliable assessments of animal abundance are key for successful conservation of endangered species. For elusive animals with individually-unique markings, camera-trap surveys are a benchmark standard for estimating local and global population abundance. Central to the reliability of resulting abundance estimates is the assumption that individuals are accurately identified from photographic captures. To quantify the risk of individual misidentification and its impact on population abundance estimates we performed an experiment under controlled conditions in which 16 captive snow leopards (Panthera uncia) were camera-trapped on 40 occasions and eight observers independently identified individuals and recaptures. Observers misclassified 12.5% of all capture occasions, resulting in systematically inflated population abundance estimates on average by one third (mean ± SD = 35 ± 21%). Our results show that identifying individually-unique individuals from camera-trap photos may not be as reliable as previously believed, implying that elusive and endangered species could be less abundant than current estimates indicate.
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Johansson, O., Rauset, G. R., Samelius, G., McCarthy, T., Andren, H., Tumursukh, L., Mishra, C. (2016). Land sharing is essential for snow leopard conservation. Biological Conservation, (203), 1–7.
Abstract: Conserving large carnivores in an increasingly crowded planet raises difficult challenges. A recurring debate is whether large carnivores can be conserved in human used landscapes (land sharing) or whether they require specially designated areas (land sparing). Here we show that 40% of the 170 protected areas in the global range of the snow leopard (Panthera uncia) are smaller than the home range of a single adult male and only 4– 13% are large enough for a 90% probability of containing 15 or more adult females. We used data from 16 snow leopards equipped with GPS collars in the Tost Mountains of South Gobi, Mongolia, to calculate home range size and overlap using three different estimators: minimum convex polygons (MCP), kernel utility distributions (Kernel), and local convex hulls (LoCoH). Local convex hull home ranges were smaller and included lower proportions of unused habitats compared to home ranges based on minimum convex polygons and Kernels. Intra-sexual home range overlapwas low, especially for adult males, suggesting that snowleopards are territorial. Mean home range size based on the LoCoH estimates was 207 km2 ± 63 SD for adult males and 124 km2 ± 41 SD for adult females. Our estimates were 6–44 times larger than earlier estimates based on VHF technology when comparing similar estimators, i.e. MCP. Our study illustrates that protected areas alone will not be able to conserve predatorswith large home ranges and conservationists and managers should not restrict their efforts to land sparing.
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